Evaluation function, for deconvolved proportions and the actual/true proportions
SCDC_peval(ptrue, pest, pest.names, select.ct = NULL)
| ptrue | a matrix of true/actual cell-type proportions for bulk samples |
|---|---|
| pest | a list of estimated cell-type proportion matrix |
| pest.names | method name for the estimated proportions in the pest list |
| select.ct | selected cell types for deconvolution |